io-port.net

io-port 05927909 Sheppard, Patrick W.; Sun, Xiaoyun; Emery, John F.; Giffard, Rona G.; Khammash, Mustafa

Quantitative characterization and analysis of the dynamic NF-kappab response in microglia. (English)

BMC Bioinform. 12, 276 (2011).

1

PDF XML AMS-TeX TEXT BIBTeX DOI

io-port 05927908 Krishnadev, Oruganty; Srinivasan, Narayanaswamy

Alignhush : alignment of hmms using structure and hydrophobicity information. (English)

BMC Bioinform. 12, 275 (2011).

2

PDF XML AMS-TeX TEXT BIBTeX DOI

io-port 05927907 Pertea, Mihaela; Pertea, Geo; Salzberg, Steven L.

Detection of lineage-specific evolutionary changes among primate species. (English)

BMC Bioinform. 12, 274 (2011).

3

PDF XML AMS-TeX TEXT BIBTeX DOI

io-port 05927906 Zhang, Ke; Wang, Haiyan; Bathke, Arne C.; Harrar, Solomon W.; Piepho, Hans-Peter; Deng, Youping

Gene set analysis for longitudinal gene expression data. (English)

BMC Bioinform. 12, 273 (2011).

4

PDF XML AMS-TeX TEXT BIBTeX DOI

io-port 05927905 Angiuoli, Samuel V.; Hotopp, Julie C.Dunning; Salzberg, Steven L.; Tettelin, Herve

Improving pan-genome annotation using whole genome multiple alignment. (English)

BMC Bioinform. 12, 272 (2011).

5

PDF XML AMS-TeX TEXT BIBTeX DOI

io-port 05927904 Ghodsi, Mohammadreza; Liu, Bo; Pop, Mihai

DNACLUST: accurate and efficient clustering of phylogenetic marker genes. (English)

BMC Bioinform. 12, 271 (2011).

6

PDF XML AMS-TeX TEXT BIBTeX DOI

io-port 05927903 Pillmann, Holger; Hatje, Klas; Odronitz, Florian; Hammesfahr, Bjorn; Kollmar, Martin

Predicting mutually exclusive spliced exons based on exon length, splice site and Reading frame conservation, and exon sequence homology. (English)

BMC Bioinform. 12, 270 (2011).

7

PDF XML AMS-TeX TEXT BIBTeX DOI

io-port 05927902 Wang, Weichen; Zhang, Xuegong

Network-based group variable selection for detecting expression quantitative trait loci (eQTL). (English)

BMC Bioinform. 12, 269 (2011).

8

PDF XML AMS-TeX TEXT BIBTeX DOI

io-port 05927901 Panchin, Alexander Y.; Mitrofanov, Sergey I.; Alexeevski, Andrei; Spirin, Sergei A.; Panchin, Yuri V.

New words in human mutagenesis. (English)

BMC Bioinform. 12, 268 (2011).

9

PDF XML AMS-TeX TEXT BIBTeX DOI

io-port 05927900 Deng, Xutao

Seqgene: a comprehensive software solution for mining exome- and transcriptome- sequencing data. (English)

BMC Bioinform. 12, 267 (2011).

10

PDF XML AMS-TeX TEXT BIBTeX DOI

io-port 05927899 Li, Jiang; Gong, Bingsheng; Chen, Xi; Liu, Tao; Wu, Chao; Zhang, Fan; Li, Chunquan; Li, Xiang; Rao, Shaoqi; Li, Xia

Dosim: an R package for similarity between diseases based on disease ontology. (English)

BMC Bioinform. 12, 266 (2011).

11

PDF XML AMS-TeX TEXT BIBTeX DOI

io-port 05927898 Gunther, Torsten; Gawenda, Inka; Schmid, Karl J.

Phenosim - A software to simulate phenotypes for testing in genome-wide association studies. (English)

BMC Bioinform. 12, 265 (2011).

12

PDF XML AMS-TeX TEXT BIBTeX DOI

io-port 05927897 Zimmermann, Michael T.; Kloczkowski, Andrzej; Jernigan, Robert L.

MAVEN: motion analysis and visualization of elastic networks and structural ensembles. (English)

BMC Bioinform. 12, 264 (2011).

13

PDF XML AMS-TeX TEXT BIBTeX DOI

io-port 05927896 Onogi, Akio; Nurimoto, Masanobu; Morita, Mitsuo

Characterization of a Bayesian genetic clustering algorithm based on a Dirichlet process prior and comparison among Bayesian clustering methods. (English)

BMC Bioinform. 12, 263 (2011).

14

PDF XML AMS-TeX TEXT BIBTeX DOI

io-port 05927895 Zhang, Changqing; Wang, Jin; Hua, Xu; Fang, Jinggui; Zhu, Huaiqiu; Gao, Xiang

A mutation degree model for the identification of transcriptional regulatory elements. (English)

BMC Bioinform. 12, 262 (2011).

15

PDF XML AMS-TeX TEXT BIBTeX DOI

io-port 05927894 Lee, Tzong-Yi; Bretaña, Neil Arvin; Lu, Cheng-Tsung

Plantphos: using maximal dependence decomposition to identify plant phosphorylation sites with substrate site specificity. (English)

BMC Bioinform. 12, 261 (2011).

16

PDF XML AMS-TeX TEXT BIBTeX DOI

io-port 05927893 Harnsomburana, Jaturon; Green, Jason M.; Barb, Adrian S.; Schaeffer, Mary; Vincent, Leszek; Shyu, Chi-Ren

Computable visually observed phenotype ontological framework for plants. (English)

BMC Bioinform. 12, 260 (2011).

17

PDF XML AMS-TeX TEXT BIBTeX DOI

io-port 05927892 Takahashi, Hiroki; Morimoto, Takuya; Ogasawara, Naotake; Kanaya, Shigehiko

AMDORAP: non-targeted metabolic profiling based on high-resolution LC-MS. (English)

BMC Bioinform. 12, 259 (2011).

18

PDF XML AMS-TeX TEXT BIBTeX DOI

io-port 05927891 Bolen, Christopher R.; Uduman, Mohamed; Kleinstein, Steven H.

Cell subset prediction for blood genomic studies. (English)

BMC Bioinform. 12, 258 (2011).

19

PDF XML AMS-TeX TEXT BIBTeX DOI

io-port 05927890 Visser, Ubbo; Abeyruwan, Saminda; Vempati, Uma; Smith, Robin P.; Lemmon, Vance P.; Schurer, Stephan C.

Bioassay ontology (BAO): A semantic description of bioassays and high-throughput screening results. (English)

BMC Bioinform. 12, 257 (2011).

20

PDF XML AMS-TeX TEXT BIBTeX DOI