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io-port 50207355 Kang, Ning; Van Mulligen, Erik M.; Kors, Jan A.

Comparing and combining chunkers of biomedical text (English)

Journal of Biomedical Informatics 44, No. 2, 354-360 (2011).

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io-port 05793573 Rebholz-Schuhmann, Dietrich; Yepes, Antonio José Jimeno; Van Mulligen, Erik M.; Kang, Ning; Kors, Jan; Milward, David; Corbett, Peter; Buyko, Ekaterina; Beisswanger, Elena; Hahn, Udo

CALBC silver standard corpus. (English)

J. Bioinform. Comput. Biol. 8, No. 1, 163-179 (2010).

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io-port 50200448 Rebholz-Schuhmann, Dietrich; Jimeno-Yepes, Antonio; Van Mulligen, Erik M.; Kang, Ning; Kors, Jan A.; Milward, David; Corbett, Peter; Buyko, Ekaterina; Beisswanger, Elena; Hahn, Udo

Calbc silver standard corpus (English)

J. Bioinformatics and Computational Biology 8, No. 1, 163-179 (2010).

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io-port 70053927 Rebholz-Schuhmann, Dietrich; Jimeno-Yepes, Antonio José; Van Mulligen, Erik M.; Kang, Ning; Kors, Jan A.; Milward, David; Corbett, Peter; Buyko, Ekaterina; Tomanek, Katrin; Beisswanger, Elena; Hahn, Udo

The CALBC silver standard corpus for biomedical named entities - A study in harmonizing the contributions from four independent named entity taggers (English)

LREC (2010).

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io-port 70369228 Rebholz-Schuhmann, Dietrich; Jimeno-Yepes, Antonio; Li, Chen; Kafkas, Senay; Lewin, Ian; Kang, Ning; Corbett, Peter; Milward, David; Buyko, Ekaterina; Beisswanger, Elena; Hornbostel, Kerstin; Kouznetsov, Alexandre; Witte, René; Laurila, Jonas B.; Baker, Christopher J. O.; Kuo, Chen-Ju; Clematide, Simon; Rinaldi, Fabio; Farkas, Richárd; Móra, György; Hara, Kazuo; Furlong, Laura Inés; Rautschka, Michael; Neves, Mariana L.; Pascual-Montano, Alberto D.; Wei, Qi; Collier, Nigel; Chowdhury, Md. Faisal Mahbub; Lavelli, Alberto; Llavori, Rafael Berlanga; Morante, Roser; Van Asch, Vincent; Daelemans, Walter; Marina, José Luís; Van Mulligen, Erik M.; Kors, Jan A.; Hahn, Udo

Assessment of NER solutions against the first and second CALBC silver standard corpus (English)

Semantic Mining in Biomedicine (2010).

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io-port 70767865 Kang, Ning; Barendse, Rogier; Afzal, Zubair; Singh, Bharat; Schuemie, Martijn J.; Van Mulligen, Erik M.; Kors, Jan A.

A concept annotation system for clinical records (English)

SWAT4LS (2010).

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io-port 05744331 Hettne, Kristina M.; Stierum, Rob H.; Schuemie, Martijn J.; Hendriksen, Peter J.M.; Schijvenaars, Bob J.A.; Van Mulligen, Erik M.; Kleinjans, Jos; Kors, Jan A.

A dictionary to identify small molecules and drugs in free text. (English)

Bioinformatics 25, No. 22, 2983-2991 (2009).

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io-port 05743986 Schulz, Stefan; Beisswanger, Elena; Den Hoek, László Van; Bodenreider, Olivier; Van Mulligen, Erik M.

Alignment of the UMLS semantic network with biotop: methodology and assessment. (English)

Bioinformatics 25, No. 12 (2009).

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io-port 50028575 Jelier, Rob; Schuemie, Martijn J.; Roes, Peter-Jan; Van Mulligen, Erik M.; Kors, Jan A.

Literature-based concept profiles for gene annotation: the issue of weighting (English)

I. J. Medical Informatics 77, No. 5, 354-362 (2008).

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io-port 50348712 Van Mulligen, Erik M.; Cases, Montserrat; Hettne, Kristina M.; Molero, Eva; Weeber, Marc; Robertson, Kevin A.; Oliva, Baldomero; De La Calle, Guillermo; Maojo, Victor

Model formulation: training multidisciplinary biomedical informatics students: three years of experience (English)

JAMIA 15, No. 2, 246-254 (2008).

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io-port 70828890 Stenzhorn, Holger; Schulz, Stefan; Beisswanger, Elena; Hahn, Udo; Den Hoek, László Van; Van Mulligen, Erik M.

Biotop and chemtop - top-domain ontologies for biology and chemistry (English)

International Semantic Web Conference (Posters & Demos) (2008).

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io-port 05456262 Bansard, Jean-Yves; Rebholz-Schuhmann, Dietrich; Cameron, Graham; Clark, Dominic; Van Mulligen, Erik M.; Beltrame, Francesco; Del Hoyo-Barbolla, Eva; Martín-Sánchez, Fernando; Milanesi, Luciano; Tollis, Ioannis G.; Der Lei, Johan Van; Coatrieux, Jean-Louis

Medical informatics and bioinformatics: A bibliometric study. (English)

IEEE Trans. Inf. Technol. Biomed. 11, No. 3, 237-243 (2007).

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io-port 50028645 Van Bemmel, Jan H.; Van Mulligen, Erik M.; Mons, Barend; Van Wijk, Mark A.; Kors, Jan A.; Van Der Lei, Johan

Databases for knowledge discovery: examples from biomedicine and health care (English)

I. J. Medical Informatics 75, No. 3-4, 257-267 (2006).

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io-port 70785601 Van Mulligen, Erik M.; Möller, Erik; Roes, Peter-Jan; Weeber, Marc; Meijssen, Gerard; Mons, Barend

An online ontology: wiktionaryz (English)

KR-MED (2006).

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io-port 70352553 Stuckenschmidt, Heiner; Siberski, Wolf; Van Mulligen, Erik M.

Towards mapping-based document retrieval in heterogeneous digital libraries (English)

Semantic Grid (2005).

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io-port 70367023 Schijvenaars, Bob J. A.; Schuemie, Martijn J.; Van Mulligen, Erik M.; Weeber, Marc; Jelier, Rob; Mons, Barend; Kors, Jan A.; Kraaij, Wessel

TREC 2005 genomics track A concept-based approach to text categorization (English)

TREC (2005).

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io-port 05426860 Der Eijk, C.Christiaan Van; Van Mulligen, Erik M.; Kors, Jan A.; Mons, Barend; Den Berg, Jan Van

Constructing an associative concept space for literature-based discovery. (English)

J. Am. Soc. Inf. Sci. Technol. 55, No. 5, 436-444 (2004).

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io-port 05094876 Stuckenschmidt, Heiner; van Harmelen, Frank; de Waard, Anita; Scerri, Tony; Bhogal, Ravinder; van Buel, Jan; Crowlesmith, Ian; Fluit, Christiaan; Kampman, Arjohn; Broekstra, Jeen; van Mulligen, Erik

Exploring Large Document Repositories with RDF Technology: The DOPE Project. (English)

IEEE Intelligent Systems 19, No.03, 34-40 (2004).

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io-port 50340953 Stuckenschmidt, Heiner; Van Harmelen, Frank; De Waard, Anita; Scerri, Tony; Bhogal, Ravinder; Van Buel, Jan; Crowlesmith, Ian; Fluit, Christiaan; Kampman, Arjohn; Broekstra, Jeen; Van Mulligen, Erik M.

Exploring large document repositories with RDF technology: the DOPE project (English)

IEEE Intelligent Systems 19, No. 3, 34-40 (2004).

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io-port 70348031 Broekstra, Jeen; Fluit, Christiaan; Kampman, Arjohn; Van Harmelen, Frank; Stuckenschmidt, Heiner; Bhogal, Ravinder; Scerri, A.; De Waard, Anita; Van Mulligen, Erik M.

The drug ontology project for elsevier - an RDF architecture enabling thesaurus-driven data integration (English)

WWW Workshop on Application Design, Development and Implementation Issues in the Semantic Web (2004).

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