io-port.net

io-port 05743663 Kong, Jun; Zhu, Fei; Stalker, Jim; Adams, David J.

{\it imapper}: a web application for the automated analysis and mapping of insertional mutagenesis sequence data against ensembl genomes. (English)

Bioinformatics 24, No. 24, 2923-2925 (2008).

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io-port 05324846 Finn, Robert D.; Stalker, James W.; Jackson, David K.; Kulesha, Eugene; Clements, Jody; Pettett, Roger

Proserver: A simple, extensible perl das server. (English)

Bioinformatics 23, No. 12, 1568-1570 (2007).

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io-port 05438004 Birney, Ewan; Andrews, T.Daniel; Cáccamo, Mario; Chen, Yuan; Clarke, Laura; Coates, G.; Cox, Tony; Cunningham, Fiona; Curwen, Val; Cutts, Tim; Down, Thomas; Durbin, Richard; Fernandez-Suarez, X.M.; Flicek, Paul; Gräf, Stefan; Hammond, Martin; Herrero, J.; Howe, Kevin L.; Iyer, V.; Jekosch, K.; Kähäri, Andreas; Kasprzyk, Arek; Keefe, Damian; Kokocinski, Felix; Kulesha, Eugene; London, D.; Longden, I.; Melsopp, Craig; Meidl, Patrick; Overduin, B.; Parker, A.; Proctor, Glenn; Prlic, Andreas; Rae, Mark; Rios, D.; Redmond, Seth; Schuster, M.; Sealy, I.; Searle, Stephen M.J.; Severin, J.; Slater, Guy; Smedley, Damian; Smith, James; Stabenau, Arne; Stalker, Jim; Trevanion, S.; Ureta-Vidal, Abel; Vogel, J.; White, S.; Woodwark, Cara; Hubbard, Tim J.P.

Ensembl 2006. (English)

Nucleic Acids Res. 34, Database-Issue, 556-561 (2006).

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io-port 70868406 Prlic, Andreas; Birney, Ewan; Cox, Tony; Down, Thomas A.; Finn, Robert D.; Gräf, Stefan; Jackson, David K.; Kähäri, Andreas; Kulesha, Eugene; Pettett, Roger; Smith, James; Stalker, Jim; Hubbard, Tim J. P.

The distributed annotation system for integration of biological data (English)

DILS, 195-203 (2006).

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io-port 05437488 Ashurst, J.L.; Chen, C.-K.; Gilbert, J.G.R.; Jekosch, K.; Keenan, S.; Meidl, Patrick; Searle, Stephen M.J.; Stalker, Jim; Storey, R.; Trevanion, S.; Wilming, L.G.; Hubbard, Tim J.P.

The vertebrate genome annotation (Vega) database. (English)

Nucleic Acids Res. 33, Database-Issue, 459-465 (2005).

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io-port 05437473 Hubbard, Tim J.P.; Andrews, D.; Cáccamo, Mario; Cameron, Graham; Chen, Yuan; Clamp, Michele E.; Clarke, Laura; Coates, G.; Cox, Tony; Cunningham, Fiona; Curwen, Val; Cutts, Tim; Down, Thomas; Durbin, Richard; Fernandez-Suarez, X.M.; Gilbert, James; Hammond, Martin; Herrero, J.; Hotz, H.; Howe, Kevin L.; Iyer, V.; Jekosch, K.; Kähäri, Andreas; Kasprzyk, Arek; Keefe, Damian; Keenan, S.; Kokocinski, Felix; London, D.; Longden, I.; Mcvicker, Graham P.; Melsopp, Craig; Meidl, Patrick; Potter, Simon C.; Proctor, Glenn; Rae, Mark; Rios, D.; Schuster, M.; Searle, Stephen M.J.; Severin, J.; Slater, Guy; Smedley, Damian; Smith, James; Spooner, William; Stabenau, Arne; Stalker, Jim; Storey, R.; Trevanion, S.; Ureta-Vidal, Abel; Vogel, J.; White, S.; Woodwark, Cara; Birney, Ewan

Ensembl 2005. (English)

Nucleic Acids Res. 33, Database-Issue, 447-453 (2005).

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io-port 05435049 Birney, Ewan; Andrews, T.Daniel; Bevan, Paul; Cáccamo, Mario; Cameron, Graham; Chen, Yuan; Clarke, Laura; Coates, G.; Cox, Tony; Cuff, James A.; Curwen, Val; Cutts, Tim; Down, Thomas; Durbin, Richard; Eyras, Eduardo; Fernandez-Suarez, X.M.; Gane, P.; Gibbins, B.; Gilbert, James; Hammond, Martin; Hotz, H.; Iyer, V.; Kähäri, Andreas; Jekosch, K.; Kasprzyk, Arek; Keefe, Damian; Keenan, S.; Lehväslaiho, Heikki; Mcvicker, Graham P.; Melsopp, Craig; Meidl, Patrick; Mongin, Emmanuel; Pettett, Roger; Potter, Simon C.; Proctor, Glenn; Rae, Mark; Searle, Stephen M.J.; Slater, Guy; Smedley, Damian; Smith, James; Spooner, William; Stabenau, Arne; Stalker, Jim; Storey, R.; Ureta-Vidal, Abel; Woodwark, Cara; Clamp, Michele E.; Hubbard, Tim J.P.

Ensembl 2004. (English)

Nucleic Acids Res. 32, Database-Issue, 468-470 (2004).

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io-port 05435246 Clamp, Michele E.; Andrews, T.Daniel; Barker, Daniel; Bevan, Paul; Cameron, Graham; Chen, Yuan; Clarke, Laura; Cox, Tony; Cuff, James A.; Curwen, Val; Down, Thomas; Durbin, Richard; Eyras, Eduardo; Gilbert, James; Hammond, Martin; Hubbard, Tim J.P.; Kasprzyk, Arek; Keefe, Damian; Lehväslaiho, Heikki; Iyer, V.; Melsopp, Craig; Mongin, Emmanuel; Pettett, Roger; Potter, Simon C.; Rust, Alastair; Schmidt, Esther; Searle, Stephen M.J.; Slater, Guy; Smith, James; Spooner, William; Stabenau, Arne; Stalker, Jim; Stupka, Elia; Ureta-Vidal, Abel; Vastrik, Imre; Birney, Ewan

Ensembl 2002: Accommodating comparative genomics. (English)

Nucleic Acids Res. 31, No. 1, 38-42 (2003).

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io-port 05435876 Hubbard, Tim J.P.; Barker, Daniel; Birney, Ewan; Cameron, Graham; Chen, Yuan; Clarke, Laura; Cox, Tony; Cuff, James A.; Curwen, Val; Down, Thomas; Durbin, Richard; Eyras, Eduardo; Gilbert, James; Hammond, Martin; Huminiecki, Lukasz; Kasprzyk, Arek; Lehväslaiho, Heikki; Lijnzaad, Philip; Melsopp, Craig; Mongin, Emmanuel; Pettett, Roger; Pocock, Matthew R.; Potter, Simon C.; Rust, Alastair; Schmidt, Esther; Searle, Stephen M.J.; Slater, Guy; Smith, James; Spooner, William; Stabenau, Arne; Stalker, Jim; Stupka, Elia; Ureta-Vidal, Abel; Vastrik, Imre; Clamp, Michele E.

The ensembl genome database project. (English)

Nucleic Acids Res. 30, No. 1, 38-41 (2002).

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