Result 1 to 20 of 39 total
Belief propagation estimation of protein and domain interactions using the sum-product algorithm (English)
IEEE Transactions on Information Theory 56, No. 2, 742-755 (2010).
1
Multiscale dynamics of macromolecules using normal mode Langevin (English)
Pacific Symposium on Biocomputing, 240-251 (2010).
2
Estimation of protein and domain interactions in the switching motility system of myxococcus xanthus (English)
Pacific Symposium on Biocomputing, 157-165 (2010).
3
Determination of specificity residues in two component systems using graphlets (English)
BIOCOMP, 860-866 (2009).
4
Addendum. cytoprophet: a {\it cytoscape} plug-in for protein and domain interaction networks inference. (English)
Bioinformatics 24, No. 23, 2805 (2008).
5
Cytoprophet: a {\it cytoscape} plug-in for protein and domain interaction networks inference. (English)
Bioinformatics 24, No. 19, 2265-2266 (2008).
6
Making the best of a bad situation: prioritized storage management in GEMS (English)
Future Generation Comp. Syst. 24, No. 1, 10-16 (2008).
7
Predicting protein-protein interactions from protein domains using a set cover approach. (English)
IEEE/ACM Transactions on Computational Biology and Bioinformatics 04, No. 01, 78-87 (2007).
8
io-port 05333457 Cickovski, Trevor;
Aras, Kedar;
Swat, Maciej;
Merks, Roeland M.H.;
Glimm, Tilmann;
Hentschel, H.George E.;
Alber, Mark S.;
Glazier, James A.;
Newman, Stuart A.;
Izaguirre, Jesus A.
From genes to organisms via the cell: A problem-solving environment for multicellular development. (English)
Computing in Science and Engineering 09, No. 04, 50-60 (2007).
9
io-port 50037536 Cickovski, Trevor M.;
Aras, Kedar;
Swat, Maciej;
Merks, Roeland;
Glimm, Tilmann;
Hentschel, H. George E.;
Alber, Mark S.;
Glazier, James A.;
Newman, Stuart A.;
Izaguirre, Jesús A.
From genes to organisms via the cell: A problem-solving environment for multicellular development (English)
Computing in Science and Engineering 9, No. 4, 50-60 (2007).
10
A parallel implementation of the cellular Potts model for simulation of cell-based morphogenesis (English)
Computer Physics Communications 176, No. 11-12, 670-681 (2007).
11
Predicting protein-protein interactions from protein domains using a set cover approach (English)
IEEE/ACM Trans. Comput. Biology Bioinform. 4, No. 1, 78-87 (2007).
12
MDL, A domain-specific language for molecular dynamics (English)
Annual Simulation Symposium, 256-266 (2007).
13
Biomolecular path sampling enabled by processing in network storage (English)
IPDPS, 1-6 (2007).
14
Biomolecular sampling: algorithms, test molecules, and metrics. (English)
Leimkuhler, Benedict (ed.) et al., New algorithms for macromolecular simulation. Selected papers based on the presentation at 4th international symposium, Leicester, UK, August 18‒21, 2004. Berlin: Springer (ISBN 3-540-25542-7/pbk). Lecture Notes in Computational Science and Engineering 49, 103-123 (2006).
15
MDSIMAID: Automatic parameter optimization in fast electrostatic algorithms. (English)
J. Comput. Chem. 26, No. 10, 1021-1031 (2005).
16
A Framework for Three-Dimensional Simulation of Morphogenesis. (English)
IEEE/ACM Transactions on Computational Biology and Bioinformatics 02, No.04, 273-288 (2005).
17
A framework for three-dimensional simulation of morphogenesis (English)
IEEE/ACM Trans. Comput. Biology Bioinform. 2, No. 4, 273-288 (2005).
18
GIPSE: streamlining the management of simulation on the grid (English)
Annual Simulation Symposium, 130-137 (2005).
19
Generosity and gluttony in GEMS: grid enabled molecular simulations (English)
HPDC, 191-200 (2005).
20
Result 1 to 20 of 39 total
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