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io-port 05891927 Sigrist, Christian J.A.; Cerutti, Lorenzo; De Castro, Edouard; Langendijk-Genevaux, Petra S.; Bulliard, Virginie; Bairoch, Amos; Hulo, Nicolas

PROSITE, a protein domain database for functional characterization and annotation. (English)

Nucleic Acids Res. 38, No. Database-Issue, 161-166 (2010).

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io-port 05746537 Koua, Dominique; Cerutti, Lorenzo; Falquet, Laurent; Sigrist, Christian J.A.; Theiler, Grégory; Hulo, Nicolas; Dunand, Christophe

Peroxibase: a database with new tools for peroxidase family classification. (English)

Nucleic Acids Res. 37, No. Database-Issue, 261-266 (2009).

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io-port 05746529 Hunter, Sarah; Apweiler, Rolf; Attwood, Teresa K.; Bairoch, Amos; Bateman, Alex; Binns, David; Bork, Peer; Das, Ujjwal; Daugherty, Louise; Duquenne, Lauranne; Finn, Robert D.; Gough, Julian; Haft, Daniel H.; Hulo, Nicolas; Kahn, Daniel; Kelly, Elizabeth; Laugraud, Aurélie; Letunic, Ivica; Lonsdale, David; Lopez, Rodrigo; Madera, Martin; Maslen, John; Mcanulla, Craig; Mcdowall, Jennifer; Mistry, Jaina; Mitchell, Alex; Mulder, Nicola J.; Natale, Darren A.; Orengo, Christine A.; Quinn, Antony F.; Selengut, Jeremy D.; Sigrist, Christian J.A.; Thimma, Manjula; Thomas, Paul D.; Valentin, Franck; Wilson, Derek; Wu, Cathy H.; Yeats, Corin

Interpro: the integrative protein signature database. (English)

Nucleic Acids Res. 37, No. Database-Issue, 211-215 (2009).

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io-port 05438496 Hulo, Nicolas; Bairoch, Amos; Bulliard, Virginie; Cerutti, Lorenzo; Cuche, Béatrice A.; De Castro, Edouard; Lachaize, Corinne; Langendijk-Genevaux, Petra S.; Sigrist, Christian J.A.

The 20 years of PROSITE. (English)

Nucleic Acids Res. 36, Database-Issue, 245-249 (2008).

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io-port 05438268 Mulder, Nicola J.; Apweiler, Rolf; Attwood, Teresa K.; Bairoch, Amos; Bateman, Alex; Binns, David; Bork, Peer; Buillard, Virginie; Cerutti, Lorenzo; Copley, Richard R.; Courcelle, Emmanuel; Das, Ujjwal; Daugherty, Louise; Dibley, Mark; Finn, Robert D.; Fleischmann, Wolfgang; Gough, Julian; Haft, Daniel H.; Hulo, Nicolas; Hunter, Sarah; Kahn, Daniel; Kanapin, Alexander; Kejariwal, Anish; Labarga, Alberto; Langendijk-Genevaux, Petra S.; Lonsdale, David; Lopez, Rodrigo; Letunic, Ivica; Madera, Martin; Maslen, John; Mcanulla, Craig; Mcdowall, Jennifer; Mistry, Jaina; Mitchell, Alex; Nikolskaya, Anastasia N.; Orchard, Sandra E.; Orengo, Christine A.; Petryszak, Robert; Selengut, Jeremy D.; Sigrist, Christian J.A.; Thomas, Paul D.; Valentin, Franck; Wilson, Derek; Wu, Cathy H.; Yeats, Corin

New developments in the interpro database. (English)

Nucleic Acids Res. 35, Database-Issue, 224-228 (2007).

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io-port 05437975 De Castro, Edouard; Sigrist, Christian J.A.; Gattiker, Alexandre; Bulliard, Virginie; Langendijk-Genevaux, Petra S.; Gasteiger, Elisabeth; Bairoch, Amos; Hulo, Nicolas

Scanprosite: Detection of PROSITE signature matches and prorule-associated functional and structural residues in proteins. (English)

Nucleic Acids Res. 34, Web-Server-Issue, 362-365 (2006).

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io-port 05437875 Hulo, Nicolas; Bairoch, Amos; Bulliard, Virginie; Cerutti, Lorenzo; De Castro, Edouard; Langendijk-Genevaux, Petra S.; Pagni, Marco; Sigrist, Christian J.A.

The PROSITE database. (English)

Nucleic Acids Res. 34, Database-Issue, 227-230 (2006).

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io-port 05437528 Mulder, Nicola J.; Apweiler, Rolf; Attwood, Teresa K.; Bairoch, Amos; Bateman, Alex; Binns, David; Bradley, Paul; Bork, Peer; Bucher, Phillip; Cerutti, Lorenzo; Copley, Richard R.; Courcelle, Emmanuel; Das, Ujjwal; Durbin, Richard; Fleischmann, Wolfgang; Gough, Julian; Haft, Daniel H.; Harte, Nicola; Hulo, Nicolas; Kahn, Daniel; Kanapin, Alexander; Krestyaninova, Maria; Lonsdale, David; Lopez, Rodrigo; Letunic, Ivica; Madera, Martin; Maslen, John; Mcdowall, Jennifer; Mitchell, Alex; Nikolskaya, Anastasia N.; Orchard, Sandra E.; Pagni, Marco; Ponting, Chris P.; Quevillon, Emmanuel; Selengut, Jeremy D.; Sigrist, Christian J.A.; Silventoinen, Ville; Studholme, David J.; Vaughan, Robert; Wu, Cathy H.

Interpro, progress and status in 2005. (English)

Nucleic Acids Res. 33, Database-Issue, 201-205 (2005).

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io-port 05435792 Hulo, Nicolas; Sigrist, Christian J.A.; Le Saux, Virginie; Langendijk-Genevaux, Petra S.; Bordoli, Lorenza; Gattiker, Alexandre; De Castro, Edouard; Bucher, Philipp; Bairoch, Amos

Recent improvements to the PROSITE database. (English)

Nucleic Acids Res. 32, Database-Issue, 134-137 (2004).

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io-port 05436402 Mulder, Nicola J.; Apweiler, Rolf; Attwood, Terri K.; Bairoch, Amos; Barrell, Daniel; Bateman, Alex; Binns, David; Biswas, Margaret; Bradley, Paul; Bork, Peer; Bucher, Philipp; Copley, Richard R.; Courcelle, Emmanuel; Das, Ujjwal; Durbin, Richard; Falquet, Laurent; Fleischmann, Wolfgang; Griffiths-Jones, Sam; Haft, Daniel H.; Harte, Nicola; Hulo, Nicolas; Kahn, Daniel; Kanapin, Alexander; Krestyaninova, Maria; Lopez, Rodrigo; Letunic, Ivica; Lonsdale, David; Silventoinen, Ville; Orchard, Sandra E.; Pagni, Marco; Peyruc, David; Ponting, Chris P.; Selengut, Jeremy D.; Servant, Florence; Sigrist, Christian J.A.; Vaughan, Robert; Zdobnov, Evgeni M.

The interpro database, 2003 brings increased coverage and new features. (English)

Nucleic Acids Res. 31, No. 1, 315-318 (2003).

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io-port 50363971 Gattiker, Alexandre; Michoud, Karine; Rivoire, Catherine; Auchincloss, Andrea H.; Coudert, Elisabeth; Lima, Tania; Kersey, Paul; Pagni, Marco; Sigrist, Christian J. A.; Lachaize, Corinne; Veuthey, Anne-Lise; Gasteiger, Elisabeth; Bairoch, Amos

Automated annotation of microbial proteomes in SWISS-PROT (English)

Computational Biology and Chemistry 27, No. 1, 49-58 (2003).

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io-port 70280669 Olson, Sigbjörn; Ferguson, Stephen; Sigrist, Christian; Pappas, Ion; Hallermann, Wock; Nolte, Lutz-Peter; Caversaccio, Marco

Real-time structural analysis for preoperative surgical planning (English)

CARS, 370-375 (2003).

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io-port 05435393 Falquet, Laurent; Pagni, Marco; Bucher, Philipp; Hulo, Nicolas; Sigrist, Christian J.A.; Hofmann, Kay; Bairoch, Amos

The PROSITE database, its status in 2002. (English)

Nucleic Acids Res. 30, No. 1, 235-238 (2002).

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io-port 50337335 Sigrist, Christian J. A.; Cerutti, Lorenzo; Hulo, Nicolas; Gattiker, Alexandre; Falquet, Laurent; Pagni, Marco; Bairoch, Amos; Bucher, Philipp

PROSITE: A documented database using patterns and profiles as motif descriptors (English)

Briefings in Bioinformatics 3, No. 3, 265-274 (2002).

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io-port 50337551 Mulder, Nicola J.; Apweiler, Rolf; Attwood, Terri K.; Bairoch, Amos; Bateman, Alex; Binns, David; Biswas, Margaret; Bradley, Paul; Bork, Peer; Bucher, Philipp; Copley, Richard R.; Courcelle, Emmanuel; Durbin, Richard; Falquet, Laurent; Fleischmann, Wolfgang; Gouzy, Jérôme; Griffiths-Jones, Sam; Haft, Daniel H.; Hermjakob, Henning; Hulo, Nicolas; Kahn, Daniel; Kanapin, Alexander; Krestyaninova, Maria; Lopez, Rodrigo; Letunic, Ivica; Orchard, Sue; Pagni, Marco; Peyruc, David; Ponting, Chris P.; Servant, Florence; Sigrist, Christian J. A.

Interpro: an integrated documentation resource for protein families, domains and functional sites (English)

Briefings in Bioinformatics 3, No. 3, 225-235 (2002).

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io-port 05434875 Apweiler, Rolf; Attwood, Terri K.; Bairoch, Amos; Bateman, Alex; Birney, Ewan; Biswas, Margaret; Bucher, Philipp; Cerutti, Lorenzo; Corpet, Florence; Croning, Michael D.R.; Durbin, Richard; Falquet, Laurent; Fleischmann, Wolfgang; Gouzy, Jérôme; Hermjakob, Henning; Hulo, Nicolas; Jonassen, Inge; Kahn, Daniel; Kanapin, Alexander; Karavidopoulou, Youla; Lopez, Rodrigo; Marx, Beate; Mulder, Nicola J.; Oinn, Thomas M.; Pagni, Marco; Servant, Florence; Sigrist, Christian J.A.; Zdobnov, Evgeni M.

The interpro database, an integrated documentation resource for protein families, domains and functional sites. (English)

Nucleic Acids Res. 29, No. 1, 37-40 (2001).

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